BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D04LP1|AL428535
(900 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1343 1735 0.0
>3x_Contig1343
Length = 6877
Score = 1735 bits (874), Expect = 0.0
Identities = 897/902 (99%), Gaps = 3/902 (0%)
Strand = Plus / Plus
Query: 1 gatcgtactgcgatccagagattcctttcgtatttgaatttccagatttggccagatcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5957 gatcgtactgcgatccagagattcctttcgtatttgaatttccagatttggccagatcga 6016
Query: 61 gacttaagtaatcatttgcttttaactctggtggtacttacagatctagcgatctcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6017 gacttaagtaatcatttgcttttaactctggtggtacttacagatctagcgatctcattc 6076
Query: 121 ggttcattgtcccataaccggtgaagcaagcatgtaatttagaatctcgagacacatgcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6077 ggttcattgtcccataaccggtgaagcaagcatgtaatttagaatctcgagacacatgcg 6136
Query: 181 gcagcaatacgtggagaagaggctaaaccgcttggtatcattttttttttttttaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6137 gcagcaatacgtggagaagaggctaaaccgcttggtatcattttttttttttttaatttt 6196
Query: 241 ggcatttcgtgcttgaataatgtctgagcttctttaggttcagcagtttgggaatacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6197 ggcatttcgtgcttgaataatgtctgagcttctttaggttcagcagtttgggaatacatt 6256
Query: 301 ctaaacaagaatttgaagaaattacctttgtttgaaacagaggctgttctatatttagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6257 ctaaacaagaatttgaagaaattacctttgtttgaaacagaggctgttctatatttagct 6316
Query: 361 tttattattcttctagctatttttgtgtttttttggctagttggcgatgcttcgaacgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6317 tttattattcttctagctatttttgtgtttttttggctagttggcgatgcttcgaacgtg 6376
Query: 421 tgttggtgagagaatcttacttcataagtctttcaattcttacctatagtagtaagtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6377 tgttggtgagagaatcttacttcataagtctttcaattcttacctatagtagtaagtgaa 6436
Query: 481 attccagattcagtatttctcgaagcaaggcgagttcagcatgcaatttaaagttcaata 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6437 attccagattcagtatttctcgaagcaaggc-agttcagcatgcaatttaaagttcaata 6495
Query: 541 cgcctggacttggtaataagccataagcgattacagcttcttgtgatgctgaatgaatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6496 cgcctggacttggtaataagccataagcgattacagcttcttgtgatgctgaatgaatct 6555
Query: 601 aatatataaagggagcgtttgttatctggtaagatcacaatttctcatctaaactcggct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6556 aatatataaagggagcgtttgttatctggtaagatcacaatttctcatctaaactcggct 6615
Query: 661 tatacgtatattcattattatatgttctctctcctaacagctgcaatatacaagawcaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6616 tatacgtatattcattattatatgttctctctcctaacagctgcaatatacaagatcaat 6675
Query: 721 agtttcattcacactagccaccaaattaatataacaacacaataatgtcttttgcctcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6676 agtttcattcacactagccaccaaattaatataacaacacaataatgtcttttgcctcaa 6735
Query: 781 tctctctagtacaagcacaagccgtcgctgcctcctctgttt-ctcatctgcctcctctg 839
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6736 tctctctagtacaagcacaagccgtcgctgcctcctctgtttcctcatctgcctcctctg 6795
Query: 840 ctgttggcttagttgg-aacggkggttccagtaccattgaaacgagctctggtgctgaat 898
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6796 ctgttggcttagttggaaacggtggttccagtaccattgaaacgagctctggtgctgaat 6855
Query: 899 ct 900
||
Sbjct: 6856 ct 6857
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,299
Number of Sequences: 1807
Number of extensions: 15299
Number of successful extensions: 437
Number of sequences better than 1.0e-20: 1
length of query: 900
length of database: 10,358,551
effective HSP length: 16
effective length of query: 884
effective length of database: 10,329,639
effective search space: 9131400876
effective search space used: 9131400876
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)